PTM Related Resources

PTM : SUMOylation        Type : Tool

GPS-SUMO
Resource Type : Tool
Description :
The Nobel Prize in Chemistry 2004 was award to Aaron Ciechanover, Avram Hershko and Irwin Rose for their discovery of ubiquitin-mediated protein degradation. (Vogel, G. et al., 2004). Numerous subsequent studies showed that the selective degradation by ubiquitination provided a critical mechanism in ...
Taxonomy : N/A
Visit : http://sumosp.biocuckoo.org/

Publication Information

Article : GPS-SUMO: a tool for the prediction of sumoylation sites and SUMO-interaction motifs
Author : Qi Zhao, Yubin Xie, Yueyuan Zheng, Shuai Jiang, Wenzhong Liu, Weiping Mu,Zexian Liu, Yong Zhao, Yu Xue, and Jian Ren
Years : 2014
PubMed : 24880689

JASSA
Resource Type : Tool
Description :
SUMOylation is a post-translational modification conserved from yeast to human that modulates several fundamental cellular processes, and have been showed to be involved in human disorders. It consists of the covalent attachment of a small ubiquitin-related modifier protein (SUMO) to a target protei ...
Taxonomy : N/A
Visit : http://www.jassa.fr/

Publication Information

Article : JASSA: a comprehensive tool for prediction of SUMOylation sites and SIMs
Author : Guillaume Beauclair, Antoine Bridier-Nahmias, Jean-François Zagury, Ali Saïb, Alessia Zamborlini
Years : 2015
PubMed : 26142185

SUMOhydro
Resource Type : Tool
Description :
SUMOhydro has been developed to predict sumoylation lysine (K) sites in proteins by introduction of hydrophobicity to binary encoding. With the assistance of Support Vector Machine (SVM)(http://svmlight.joachims.org/), the predictor was trained and tested in a new and stringent sumoylation sites dat ...
Taxonomy : N/A
Visit : http://protein.cau.edu.cn/others/SUMOhydro/introduction.html

Publication Information

Article : SUMOhydro: a novel method for the prediction of sumoylation sites based on hydrophobic properties
Author : Yong-Zi Chen, Zhen Chen, Yu-Ai Gong, Guoguang Ying
Years : 2012
PubMed : 22720073

SUMOplot
Resource Type : Tool
Description :
The SUMOplot™ Analysis Program predicts and scores sumoylation sites in your protein. The presence of this post-translational modification may help explain larger MWs than expected on SDS gels due to attachment of SUMO protein (11kDa) at multiple positions in your protein. SUMO-1 (small ubiquitin-r ...
Taxonomy : N/A
Visit : http://www.abgent.com/sumoplot

Publication Information

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