Basic Information | Overview of PTM Sites | Experimental PTM Sites | Protein-Protein Interactions | Drug and Disease Associations | Related Literatures
Basic Information
Protein Name :  Scaffold attachment factor B1  

UniProtKB / Swiss-Prot ID :  SAFB1_RAT

Gene Name (Synonyms) : 
Safb, Safb1  

Species :  Rattus norvegicus (Rat). 

Subcellular Localization :  Nucleus. 

Protein Function :  Binds to scaffold/matrix attachment region (S/MAR) DNA and forms a molecular assembly point to allow the formation of a 'transcriptosomal' complex (consisting of SR proteins and RNA polymerase II) coupling transcription and RNA processing. When associated with RBMX, binds to and stimulates transcription from the SREBF1 promoter (By similarity). 

Protein Sequence MAETLSGLGDSGAASAAAVSSAASETGTRRLSDLRVIDLRAELRKRNLTSSGNKSVLMERLKKAIEEEGG...
Predicted Secondary Structure CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEEEEHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCC...
Protein Variant -
- top -

Overview of Protein Modification Sites with Functional and Structural Information
Accessible Surface Area (ASA)
Pred. Secondary
Real Secondary
Disorder Prediction
Protein Domain
&
Experimental PTM Sites
Predicted PTM Sites
- top -

Experimental Post-Translational Modification Sites Download
Locations
Modification
Substrate Sites
&
Secondary Structure
Accessible Surface Area (%)
Resource
Reference
Structural Characterization
Orthologous
Protein Cluster
366PhosphoserineTAAPSPEPR
HCCCCCCCC
36.85PhosphoELM
Link-
366PhosphoserineTAAPSPEPR
HCCCCCCCC
36.85Phosphositeplus
Link-
366PhosphoserineTAAPSPEPR
HCCCCCCCC
36.85SysPTM
Link-
366Phosphoserine.TAAPSPEPR
HCCCCCCCC
36.85UniProtKB
Link-
626PhosphoserineRSVVSFDKV
CCCCCCCCC
26.10SysPTM
Link-
- top -

Protein-Protein Interactions
      Interacting Protein      
Interaction type
Source ID
      Resource      
      Pubmed ID      
Domain-Domain Interactions
There are no Protein-Protein Interactions.
- top -

Disease Reference
Drug Reference
- top -
Related Literatures of Post-Translational Modification
Phosphorylation
ReferencePubMed
"Phosphoproteomic analysis of rat liver by high capacity IMAC and LC-MS/MS.";
Moser K., White F.M.;
J. Proteome Res. 5:98-104(2006).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-366, AND MASSSPECTROMETRY.
- top -
Basic Information | Overview of PTM Sites | Experimental PTM Sites | Protein-Protein Interactions | Drug and Disease Associations | Related Literatures